Omphalitis
Basics
Description
Omphalitis, a bacterial infection of the umbilical stump, begins in the neonatal period as a superficial cellulitis but may track along umbilical vessels and progress to systemic illness.
Epidemiology
- Episodes of omphalitis are usually sporadic.
 - Mean age of onset is 5 to 9 days in term infants and 3 to 5 days in preterm infants.
 - Omphalitis is rare in developed countries, with an incidence of approximately 1 out of 1,000 live births, but in developing countries, incidence may be upward of 8–22% of infants, depending on risk factors.
 
Risk Factors
- Low birth weight
 - Prior umbilical catheterization
 - Septic delivery
 - Home birth
 - Prolonged rupture of membranes
 - Chorioamnionitis/funisitis
 
General Prevention
- There are multiple methods used for umbilical cord care, including dry cord care, triple dye, 4% chlorhexidine, and 70% alcohol solution.
 - Clean, dry cord care is recommended by the American Academy of Pediatrics (AAP) and World Health Organization (WHO) for infants born in a hospital setting in developed countries.
 - Aseptic delivery and hygienic cord care, including cutting the cord in a sterile manner (with gloves and sterile instruments), are key to preventing infection.
 - There is significant evidence to support the use of topical 4% chlorhexidine in infants born at home in settings with high neonatal mortality (>30 deaths per 1,000 live births).
 - There is no evidence that application of an antiseptic to the umbilical cord is better than clean, dry cord care in a hospital setting.
 
Pathophysiology
- Once the umbilical cord is cut after birth, the stump dries and falls of within 5 to 15 days.
 - The umbilical stump is colonized by microorganisms soon after birth, both pathogenic and nonpathogenic.
 - Pathogenic bacteria may invade the umbilical stump, leading to omphalitis.
- The type of organisms present varies depending on the birth setting and quality of cord care.
 - In high-resource settings, gram-positive organisms are most likely, and gram-negative organisms are more common in low-resource settings.
 
 - Omphalitis may present in varying severity:
- Funisitis/umbilical discharge—abnormal-appearing umbilical cord and purulent, malodorous discharge
 - Omphalitis with associated cellulitis—periumbilical erythema and tenderness in addition to cord discharge
 - Omphalitis with systemic signs of infection
 - Omphalitis with necrotizing fasciitis—crepitus, bullae, and evidence of involvement of superficial and deep fascia, often associated with septic shock
 
 - Unhygienic cord care, as well as the application of harmful substances to the umbilical cord, can lead to an increased incidence of omphalitis in developing countries.
 - Established aerobic bacterial infection, necrotic tissue, and poor blood supply facilitate the growth of anaerobic organisms.
 
Etiology
- The most common causative organisms are gram-positive cocci, including Staphylococcus aureus (MSSA and methicillin-resistant S. aureus [MRSA]), group A and group B streptococci.
 - Gram-negative pathogens include Escherichia coli, Klebsiella pneumoniae, Pseudomonas species, and Proteus mirabilis.
 - Gram-positive organisms predominate; however, antistaphylococcal cord care has led to an increase in colonization and infection with gram-negative organisms.
 - Anaerobic bacteria, including Bacteroides fragilis and Clostridium perfringens, are most likely in cases complicated by necrotizing fasciitis or myonecrosis.
 - Clostridium tetani and Clostridium sordellii are seen primarily in developing countries when unhygienic instruments may be used to cut the cord and/or cow dung is used in cord care.
 
Commonly Associated Conditions
- Leukocyte adhesion deficiency (LAD)
- Omphalitis may be the initial manifestation of one of the LADs.
 - LADs are rare, autosomal recessive immunologic disorders affecting leukocyte adhesion to blood vessel walls.
 - Cord separation requires the influx of leukocytes; therefore, this deficiency causes delayed separation and can cause concomitant omphalitis.
 - Infants also may present with leukocytosis, absence of pus formation, impaired wound healing, and recurrent infections localized to the skin and mucosal surfaces.
 - Treatment involves prompt recognition of infection and use of appropriate antibiotics. Severe cases may need hematopoietic stem cell transplantation.
 
 - Neutropenia
- Omphalitis complicated by sepsis can be associated with neutropenia.
 - Other syndromes of neonatal neutropenia may present initially with omphalitis.
- Neonatal alloimmune neutropenia: Maternal IgG antibodies cross the placenta and cause immune-mediated destruction of fetal neutrophils bearing antigens differing from mother’s.
 - Other causes of neutropenia: autoimmune neutropenias, X-linked agammaglobulinemia, hyper-IgM immunodeficiency syndromes, HIV, glycogen storage disease type IB, or disorders of amino acid metabolism
 
 
 - Anatomic abnormalities
- Patent urachus:
- The urachus, a tubular structure connecting the bladder to the umbilicus, should obliterate by the fifth gestational month.
 - If it remains patent, a continuous, significant amount of urine can drain from the umbilicus.
 
 - Persistent omphalomesenteric duct:
- Congenital malformation where a communication exists between the umbilicus and the gut
 - Drainage consists of intestinal secretions.
 
 - Excessive granulation tissue:
- Results from delayed healing of cord stump
 - Drainage is serosanguinous and pink.
 
 
 - Patent urachus:
 - Considerations in preterm infants:
- Preterm infants are more susceptible secondary to immature immune defenses (including the skin) and possible umbilical catheterization.
 - These infants are more likely to present with omphalitis at an earlier age and with low neutrophil counts.
 
 
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Citation
Cabana, Michael D., editor. "Omphalitis." 5-Minute Pediatric Consult, 8th ed., Wolters Kluwer, 2019. Pediatrics Central, peds.unboundmedicine.com/pedscentral/view/5-Minute-Pediatric-Consult/617153/all/Omphalitis. 
Omphalitis. In: Cabana MDM, ed. 5-Minute Pediatric Consult. Wolters Kluwer; 2019. https://peds.unboundmedicine.com/pedscentral/view/5-Minute-Pediatric-Consult/617153/all/Omphalitis. Accessed November 3, 2025.
Omphalitis. (2019). In Cabana, M. D. (Ed.), 5-Minute Pediatric Consult (8th ed.). Wolters Kluwer. https://peds.unboundmedicine.com/pedscentral/view/5-Minute-Pediatric-Consult/617153/all/Omphalitis
Omphalitis [Internet]. In: Cabana MDM, editors. 5-Minute Pediatric Consult. Wolters Kluwer; 2019. [cited 2025 November 03]. Available from: https://peds.unboundmedicine.com/pedscentral/view/5-Minute-Pediatric-Consult/617153/all/Omphalitis.
* Article titles in AMA citation format should be in sentence-case
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ED  -  Cabana,Michael D,
BT  -  5-Minute Pediatric Consult
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5-Minute Pediatric Consult

