Omphalitis
BASICS
DESCRIPTION
Omphalitis, a bacterial infection of the umbilical stump, begins in the neonatal period as a superficial cellulitis but may track along umbilical vessels and progress to systemic illness.
EPIDEMIOLOGY
- Episodes of omphalitis are usually sporadic.
- Mean age of onset is 5 to 9 days in term infants and 3 to 5 days in preterm infants.
- Omphalitis is rare in developed countries, with an incidence of approximately 1 out of 1,000 live births, but in developing countries, incidence may be upwards of 8–22% of infants, depending on risk factors.
ETIOLOGY
- The most common causative organisms are gram-positive cocci, including Staphylococcus aureus (MSSA and MRSA), group A and group B streptococci.
- Gram-negative pathogens include Escherichia coli, Klebsiella pneumoniae, Pseudomonas species, and Proteus mirabilis.
- Gram-positive organisms predominate; however, antistaphylococcal cord care has led to an increase in colonization and infection with gram-negative organisms.
- Anaerobic bacteria, including Bacteroides fragilis and Clostridium perfringens, are most likely in cases complicated by necrotizing fasciitis or myonecrosis.
- Clostridium tetani and Clostridium sordellii are seen primarily in developing countries when unhygienic instruments may be used to cut the cord and/or cow dung is used in cord care.
RISK FACTORS
- Low birth weight
- Prior umbilical catheterization
- Septic delivery
- Home birth
- Prolonged rupture of membranes
- Chorioamnionitis/funisitis
- Poor hand hygiene in caregivers
- Material of baby clothes, especially noncotton clothing
GENERAL PREVENTION
- There are multiple methods used for umbilical cord care, including dry cord care, triple dye, 4% chlorhexidine, and 70% alcohol solution.
- Clean, dry cord care is recommended by the American Academy of Pediatrics (AAP) and World Health Organization (WHO) for infants born in a hospital setting in developed countries.
- Aseptic delivery and hygienic cord care, including cutting the cord in a sterile manner (with gloves and sterile instruments), are key to preventing infection.
- There is significant evidence to support the use of topical 4% chlorhexidine in infants born at home in settings with high neonatal mortality (>30 deaths per 1,000 live births).
- There is no evidence that application of an antiseptic to the umbilical cord is better than clean, dry cord care in a hospital setting.
- There is evidence suggesting that noncotton material clothing for infants can significantly increase the risk of developing omphalitis in developing countries.
PATHOPHYSIOLOGY
- Once the umbilical cord is cut after birth, the stump dries and falls off within 5 to 15 days.
- The umbilical stump is colonized by microorganisms soon after birth, both pathogenic and non-pathogenic.
- Pathogenic bacteria may invade the umbilical stump, leading to omphalitis.
- The type of organisms present varies depending on the birth setting and quality of cord care.
- In high-resource settings, gram-positive organisms are most likely, and gram-negative organisms are more common in low-resource settings.
- Omphalitis may present in varying severity:
- Funisitis/umbilical discharge—abnormal-appearing umbilical cord and purulent, malodorous discharge
- Omphalitis with associated cellulitis—periumbilical erythema and tenderness in addition to cord discharge
- Omphalitis with systemic signs of infection
- Omphalitis with necrotizing fasciitis—crepitus, bullae, and evidence of involvement of superficial and deep fascia, often associated with septic shock
- Unhygienic cord care, as well as the application of harmful substances to the umbilical cord, can lead to an increased incidence of omphalitis in developing countries.
- Established aerobic bacterial infection, necrotic tissue, and poor blood supply facilitate the growth of anaerobic organisms.
COMMONLY ASSOCIATED CONDITIONS
- Leukocyte adhesion deficiency (LAD)
- Omphalitis may be the initial manifestation of one of the LADs.
- LADs are rare, autosomal recessive immunologic disorders affecting leukocyte adhesion to blood vessel walls.
- Cord separation requires the influx of leukocytes; therefore, this deficiency causes delayed separation and can cause concomitant omphalitis.
- Treatment involves prompt recognition of infection and use of appropriate antibiotics. Severe cases may need hematopoietic stem cell transplantation.
- Sepsis
- Omphalitis complicated by sepsis can be associated with neutropenia.
- It is important to include umbilical cord evaluation in the exam of newborns presenting with sepsis as omphalitis can be a potential cause.
- Omphalitis complicated by sepsis can be associated with neutropenia.
- Anatomic abnormalities
- Patent urachus:
- The urachus, a tubular structure connecting the bladder to the umbilicus, should obliterate by the 5th gestational month.
- If it remains patent, a continuous, significant amount of urine can drain from the umbilicus.
- Persistent omphalomesenteric duct:
- Congenital malformation where a communication exists between the umbilicus and the gut.
- Drainage consists of intestinal secretions.
- Excessive granulation tissue:
- Results from delayed healing of cord stump
- Drainage is serosanguinous and pink.
- Patent urachus:
- Considerations in preterm infants:
- Preterm infants are more susceptible secondary to immature immune defenses (including the skin) and possible umbilical catheterization.
- These infants are more likely to present with omphalitis at an earlier age and with low neutrophil counts.
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Citation
Cabana, Michael D., editor. "Omphalitis." 5-Minute Pediatric Consult, 9th ed., Wolters Kluwer, 2025. Pediatrics Central, peds.unboundmedicine.com/pedscentral/view/5-Minute-Pediatric-Consult/617153/all/Omphalitis.
Omphalitis. In: Cabana MDM, ed. 5-Minute Pediatric Consult. Wolters Kluwer; 2025. https://peds.unboundmedicine.com/pedscentral/view/5-Minute-Pediatric-Consult/617153/all/Omphalitis. Accessed August 15, 2026.
Omphalitis. (2025). In Cabana, M. D. (Ed.), 5-Minute Pediatric Consult (9th ed.). Wolters Kluwer. https://peds.unboundmedicine.com/pedscentral/view/5-Minute-Pediatric-Consult/617153/all/Omphalitis
Omphalitis [Internet]. In: Cabana MDM, ed. 5-Minute Pediatric Consult. Wolters Kluwer; 2025. [cited 2026 August 15]. Available from: https://peds.unboundmedicine.com/pedscentral/view/5-Minute-Pediatric-Consult/617153/all/Omphalitis.
* Article titles in AMA citation format should be in sentence-case
TY - ELEC
T1 - Omphalitis
ID - 617153
ED - Cabana,Michael D,
BT - 5-Minute Pediatric Consult
UR - https://peds.unboundmedicine.com/pedscentral/view/5-Minute-Pediatric-Consult/617153/all/Omphalitis
PB - Wolters Kluwer
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DB - Pediatrics Central
DP - Unbound Medicine
ER -

5-Minute Pediatric Consult

