Anorectal Malformation
BASICS
DESCRIPTION
- Anorectal malformation (ARM), formerly called imperforate anus, is a spectrum of congenital abnormalities in which the anus and the rectum fail to develop properly during the 5th to 7th week of fetal development.
- The spectrum of ARM ranges in severity, from imperforate anal membrane to complete caudal regression.
- ARM has been classically subcategorized into low or high anomalies.
- In a low lesion, the colon remains close to the skin, and there may be a stenosis of the anus, or the anus may be missing altogether, with the rectum ending in a blind pouch.
- In a high lesion, the colon is higher up in the pelvis, with a fistula connecting the rectum and the bladder, urethra, or the vagina.
- Currently, a therapeutic- and prognostic-related classification of ARM is based on the presence or absence of fistula, and the type of fistulous connection (perineal, bladder, urethra, vestibular, vagina) is being used:
- Males: rectoperineal, rectourethral bulbar or prostatic (most common), rectobladder neck, imperforate anus without fistula (5%), rectal atresia/rectal stenosis (<1%)
- Females: rectoperineal, rectovestibular (most common), cloaca, complex malformations, imperforate anus without fistula, rectal atresia/rectal stenosis
EPIDEMIOLOGY
- Occurs in approximately 1 in 4,000 to 5,000 live births
- Slightly more common in males
RISK FACTORS
Genetics
- An isolated defect (~1/3) or part of a syndrome or association (~2/3)
- Chromosomal abnormalities in 4.5–11%; the most common anomaly is trisomy 21 where patients with ARM typically have ARM without fistula (95%).
- 1% risk for couple having a second child with ARM
- Mutations in specific transcription factors found with Currarino, Townes-Brock, and Pallister-Hall syndromes
PATHOPHYSIOLOGY
- During the 6th week of fetal development, the hindgut comes in contact with the cloacal membrane. The hindgut is divided into a ventral urogenital and dorsal rectal component. By the 8th week, the dorsal 1/2 perforates to the exterior. In ARM, the process is arrested during this critical period.
- There is a wide spectrum of anatomic variants of ARM, commonly associated with genitourinary and spinal defects.
- Cloaca is a complex defect, where the rectum, urethra, and the vagina drain into a common channel that communicates with the perineum. They are further classified into short (<3 cm) or long (>3 cm) common channel.
- A fistula communicating from the rectum to the external opening (perineal fistula) or to the urogenital system is present in 95% of cases.
- In females, the most common defect is a rectovestibular fistula where the rectum opens into the vestibule.
- In males, the most common defect is a rectourethral fistula from the rectum to lower posterior urethra (bulbar) or upper posterior urethra (prostatic).
COMMONLY ASSOCIATED CONDITIONS
- Anomalies present in 50–67% of patients with ARM
- VACTERL is the most common associated anomaly and includes vertebral, anorectal, cardiac, tracheoesophageal fistula, renal, and limb anomalies.
- Müllerian duct aplasia, renal aplasia, and cervicothoracic somite dysplasia (MURCS)
- Omphalocele, exstrophy, imperforate anus, and spinal defects (OEIS) are also common associations.
- Associated organ-specific anomalies:
- Genitourinary (33–50%): vesicoureteral reflux, renal agenesis, horseshoe kidney, multicystic kidney, ectopic kidney, obstruction, hypoplasia/dysplasia, and chronic renal failure (2–6%)
- Spine/sacrum (33–50%): tethered cord (most common 20–30%), hypoplastic sacrum, sacral agenesis, presacral mass, vertebral defects formation/fusion, myelomeningocele
- Gastrointestinal (5–10%): tracheoesophageal atresia and esophageal atresia; others include malrotation, omphalocele, and annular pancreas.
- Gynecologic (~7–17%): vaginal atresia, absent vagina/cervix/uterus, septate vagina, and duplicate uterus
- Cardiovascular defects (10–30%): atrial and ventricular septal defects
- Other associated syndromes:
- Currarino (sacral agenesis, presacral mass, and ARM)
- Trisomy 21, 13, and 18
- Townes-Brock
- Fragile X
- McKusick-Kaufman
- Johanson-Blizzard
- Opitz-Kaveggia
There's more to see -- the rest of this topic is available only to subscribers.
Citation
Cabana, Michael D., editor. "Anorectal Malformation." 5-Minute Pediatric Consult, 9th ed., Wolters Kluwer, 2025. Pediatrics Central, peds.unboundmedicine.com/pedscentral/view/5-Minute-Pediatric-Consult/619001/all/Anorectal_Malformation.
Anorectal Malformation. In: Cabana MDM, ed. 5-Minute Pediatric Consult. Wolters Kluwer; 2025. https://peds.unboundmedicine.com/pedscentral/view/5-Minute-Pediatric-Consult/619001/all/Anorectal_Malformation. Accessed June 10, 2026.
Anorectal Malformation. (2025). In Cabana, M. D. (Ed.), 5-Minute Pediatric Consult (9th ed.). Wolters Kluwer. https://peds.unboundmedicine.com/pedscentral/view/5-Minute-Pediatric-Consult/619001/all/Anorectal_Malformation
Anorectal Malformation [Internet]. In: Cabana MDM, editors. 5-Minute Pediatric Consult. Wolters Kluwer; 2025. [cited 2026 June 10]. Available from: https://peds.unboundmedicine.com/pedscentral/view/5-Minute-Pediatric-Consult/619001/all/Anorectal_Malformation.
* Article titles in AMA citation format should be in sentence-case
TY - ELEC
T1 - Anorectal Malformation
ID - 619001
ED - Cabana,Michael D,
BT - 5-Minute Pediatric Consult
UR - https://peds.unboundmedicine.com/pedscentral/view/5-Minute-Pediatric-Consult/619001/all/Anorectal_Malformation
PB - Wolters Kluwer
ET - 9
DB - Pediatrics Central
DP - Unbound Medicine
ER -

5-Minute Pediatric Consult

